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siddharthtumre/
biobert-finetuned-ner

Name: biobert-finetuned-ner
Availability: InStock

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biobert-finetuned-ner

This model is a fine-tuned version of dmis-lab/biobert-base-cased-v1.2 on the jnlpba dataset. It achieves the following results on the evaluation set:

Loss: 0.5113
Precision: 0.6551
Recall: 0.7646
F1: 0.7056
Accuracy: 0.9108

Model description

More information needed

Intended uses & limitations

More information needed

Training and evaluation data

More information needed

Training procedure

Training hyperparameters

The following hyperparameters were used during training:

learning_rate: 2e-05
train_batch_size: 16
eval_batch_size: 16
seed: 42
optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
lr_scheduler_type: linear
num_epochs: 5

Training results

Training Loss	Epoch	Step	Validation Loss	Precision	Recall	F1	Accuracy
0.1815	1.0	2319	0.2706	0.6538	0.7704	0.7073	0.9160
0.1226	2.0	4638	0.3230	0.6524	0.7675	0.7053	0.9118
0.0813	3.0	6957	0.3974	0.6483	0.7611	0.7002	0.9101
0.0521	4.0	9276	0.4529	0.6575	0.7652	0.7073	0.9121
0.0356	5.0	11595	0.5113	0.6551	0.7646	0.7056	0.9108

Framework versions

Transformers 4.21.1
Pytorch 1.12.1+cu113
Datasets 2.4.0
Tokenizers 0.12.1

siddharthtumre/biobert-finetuned-ner

biobert-finetuned-ner

Model description

Intended uses & limitations

Training and evaluation data

Training procedure

Training hyperparameters

Training results

Framework versions

siddharthtumre/
biobert-finetuned-ner