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MahmoodLab/
hest

Name: hest
Creator: MahmoodLab
License: https://spdx.org/licenses/CC-BY-NC-SA-4.0.html

spatial-transcriptomics

histology

pathology

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	Model Card for HEST-1k







	
	What is HEST-1k?

A collection of 1,276 spatial transcriptomic profiles, each linked and aligned to a Whole Slide Image (with pixel size < 1.15 µm/px) and metadata. HEST-1k was assembled from 180 public and internal cohorts encompassing: 26 organs 2 species (Homo Sapiens and Mus Musculus) 398 cancer samples from 25 cancer types.

HEST-1k processing enabled the identification of >1.5 million expression/morphology pairs and >76 million nuclei… See the full description on the dataset page: https://huggingface.co/datasets/MahmoodLab/hest.