Pre-trained Borzoi foundation model (johahi/borzoi-replicate-0) fine-tuned on the silicusPlusCGDCtcf synthetic genome with CUT&Tag H3K27me3 and H3K4me3 targets.
Genome: Silicus + CGD + CTCF
Base model: johahi/borzoi-replicate-0
Receptive field: 524 kb
Resolution: 32 bp
Paper: Casimov, Lifshitz et al., "Reverse engineering the genomic encodings of the pluripotent epigenome"
