SentenceTransformer(
(0): Transformer({'max_seq_length': 40960, 'do_lower_case': False, 'architecture': 'Qwen3Model'})
(1): Pooling({'word_embedding_dimension': 2560, 'pooling_mode_cls_token': False, 'pooling_mode_mean_tokens': False, 'pooling_mode_max_tokens': False, 'pooling_mode_mean_sqrt_len_tokens': False, 'pooling_mode_weightedmean_tokens': False, 'pooling_mode_lasttoken': True, 'include_prompt': True})
(2): Normalize()
)pip install -U sentence-transformers1from sentence_transformers import SentenceTransformer
2
3# Download from the 🤗 Hub
4model = SentenceTransformer("novacardsai/qwen3-med-classifier")
5# Run inference
6queries = [
7 "Instruct: Classify this medical flashcard into one or more relevant categories.\nQuery: picture frame vertebra in mixed phase of pagets disease",
8]
9documents = [
10 'Instruct: Classify this medical flashcard into one or more relevant categories.\nQuery: do patients with radial head subluxation experience sensory loss over the dorsal side of the hand or wrist? no.',
11 'Instruct: Classify this medical flashcard into one or more relevant categories.\nQuery: bronchiolitis obliterans (constrictive) is a patchy chronic inflammation & fibrosis of the bronchioles, which leads to collapse/obliteration of the bronchioles',
12 'Instruct: Classify this medical flashcard into one or more relevant categories.\nQuery: diseases such as minimal change disease, focal segmental glomerulosclerosis, and membranous nephropathy fall under the category of podocytopathies, which affect the podocytes of the kidney.',
13]
14query_embeddings = model.encode_query(queries)
15document_embeddings = model.encode_document(documents)
16print(query_embeddings.shape, document_embeddings.shape)
17# [1, 2560] [3, 2560]
18
19# Get the similarity scores for the embeddings
20similarities = model.similarity(query_embeddings, document_embeddings)
21print(similarities)
22# tensor([[0.9688, 0.5820, 0.5742]], dtype=torch.bfloat16)med_flashcard_valTripletEvaluator| Metric | Value |
|---|---|
| cosine_accuracy | 0.962 |
sentence_0, sentence_1, and sentence_2| sentence_0 | sentence_1 | sentence_2 | |
|---|---|---|---|
| type | string | string | string |
| details |
|
|
|
| sentence_0 | sentence_1 | sentence_2 |
|---|---|---|
Instruct: Classify this medical flashcard into one or more relevant categories.[object Object]Query: tobacco juice color amniotic fluid is seen in intrauterine death of fetus | Instruct: Classify this medical flashcard into one or more relevant categories.[object Object]Query: in cases of acute fatty liver of pregnancy, an increase in total bilirubin levels is commonly observed. | Instruct: Classify this medical flashcard into one or more relevant categories.[object Object]Query: during pregnancy, avoid these vaccines: measles, mumps, and rubella (mmr), varicella, polio, and intranasal influenza. |
Instruct: Classify this medical flashcard into one or more relevant categories.[object Object]Query: 10 no. karman cannula is used at 11 weeks of pregnancy | Instruct: Classify this medical flashcard into one or more relevant categories.[object Object]Query: a persistent moro reflex is observed in individuals with cerebral palsy. | Instruct: Classify this medical flashcard into one or more relevant categories.[object Object]Query: what enzyme in macrophages is primarily used to destroy phagocytosed material? lysozyme |
Instruct: Classify this medical flashcard into one or more relevant categories.[object Object]Query: the presence of the dc-sign receptor increases susceptibility to hiv infection. | Instruct: Classify this medical flashcard into one or more relevant categories.[object Object]Query: what is the name of the blood transfusion reaction that typically manifests with symptoms including fever, headaches, chills, and flushing? it is called a febrile nonhemolytic transfusion reaction. | Instruct: Classify this medical flashcard into one or more relevant categories.[object Object]Query: which medications are used in the treatment of acute bipolar depression? 1. lurasidone2. olanzapine + fluoxetine3. lithium4. valproate5. quetiapine6. lamotrigine |
MultipleNegativesRankingLoss with these parameters:
1{
2 "scale": 20.0,
3 "similarity_fct": "cos_sim",
4 "gather_across_devices": false
5}eval_strategy: stepsnum_train_epochs: 1multi_dataset_batch_sampler: round_robinoverwrite_output_dir: Falsedo_predict: Falseeval_strategy: stepsprediction_loss_only: Trueper_device_train_batch_size: 8per_device_eval_batch_size: 8per_gpu_train_batch_size: Noneper_gpu_eval_batch_size: Nonegradient_accumulation_steps: 1eval_accumulation_steps: Nonetorch_empty_cache_steps: Nonelearning_rate: 5e-05weight_decay: 0.0adam_beta1: 0.9adam_beta2: 0.999adam_epsilon: 1e-08max_grad_norm: 1num_train_epochs: 1max_steps: -1lr_scheduler_type: linearlr_scheduler_kwargs: {}warmup_ratio: 0.0warmup_steps: 0log_level: passivelog_level_replica: warninglog_on_each_node: Truelogging_nan_inf_filter: Truesave_safetensors: Truesave_on_each_node: Falsesave_only_model: Falserestore_callback_states_from_checkpoint: Falseno_cuda: Falseuse_cpu: Falseuse_mps_device: Falseseed: 42data_seed: Nonejit_mode_eval: Falsebf16: Falsefp16: Falsefp16_opt_level: O1half_precision_backend: autobf16_full_eval: Falsefp16_full_eval: Falsetf32: Nonelocal_rank: 0ddp_backend: Nonetpu_num_cores: Nonetpu_metrics_debug: Falsedebug: []dataloader_drop_last: Falsedataloader_num_workers: 0dataloader_prefetch_factor: Nonepast_index: -1disable_tqdm: Falseremove_unused_columns: Truelabel_names: Noneload_best_model_at_end: Falseignore_data_skip: Falsefsdp: []fsdp_min_num_params: 0fsdp_config: {'min_num_params': 0, 'xla': False, 'xla_fsdp_v2': False, 'xla_fsdp_grad_ckpt': False}fsdp_transformer_layer_cls_to_wrap: Noneaccelerator_config: {'split_batches': False, 'dispatch_batches': None, 'even_batches': True, 'use_seedable_sampler': True, 'non_blocking': False, 'gradient_accumulation_kwargs': None}parallelism_config: Nonedeepspeed: Nonelabel_smoothing_factor: 0.0optim: adamw_torch_fusedoptim_args: Noneadafactor: Falsegroup_by_length: Falselength_column_name: lengthproject: huggingfacetrackio_space_id: trackioddp_find_unused_parameters: Noneddp_bucket_cap_mb: Noneddp_broadcast_buffers: Falsedataloader_pin_memory: Truedataloader_persistent_workers: Falseskip_memory_metrics: Trueuse_legacy_prediction_loop: Falsepush_to_hub: Falseresume_from_checkpoint: Nonehub_model_id: Nonehub_strategy: every_savehub_private_repo: Nonehub_always_push: Falsehub_revision: Nonegradient_checkpointing: Falsegradient_checkpointing_kwargs: Noneinclude_inputs_for_metrics: Falseinclude_for_metrics: []eval_do_concat_batches: Truefp16_backend: autopush_to_hub_model_id: Nonepush_to_hub_organization: Nonemp_parameters:auto_find_batch_size: Falsefull_determinism: Falsetorchdynamo: Noneray_scope: lastddp_timeout: 1800torch_compile: Falsetorch_compile_backend: Nonetorch_compile_mode: Noneinclude_tokens_per_second: Falseinclude_num_input_tokens_seen: noneftune_noise_alpha: Noneoptim_target_modules: Nonebatch_eval_metrics: Falseeval_on_start: Falseuse_liger_kernel: Falseliger_kernel_config: Noneeval_use_gather_object: Falseaverage_tokens_across_devices: Trueprompts: Nonebatch_sampler: batch_samplermulti_dataset_batch_sampler: round_robinrouter_mapping: {}learning_rate_mapping: {}| Epoch | Step | Training Loss | med_flashcard_val_cosine_accuracy |
|---|---|---|---|
| 0.0609 | 500 | 1.9105 | - |
| 0.1217 | 1000 | 1.4749 | - |
| 0.1826 | 1500 | 1.3069 | - |
| 0.2000 | 1643 | - | 0.9482 |
| 0.2434 | 2000 | 1.202 | - |
| 0.3043 | 2500 | 1.1576 | - |
| 0.3651 | 3000 | 1.1167 | - |
| 0.4000 | 3286 | - | 0.9544 |
| 0.4260 | 3500 | 1.0333 | - |
| 0.4869 | 4000 | 1.0287 | - |
| 0.5477 | 4500 | 1.0063 | - |
| 0.5999 | 4929 | - | 0.9620 |
| 0.6086 | 5000 | 0.9879 | - |
| 0.6694 | 5500 | 0.9673 | - |
| 0.7303 | 6000 | 0.953 | - |
| 0.7911 | 6500 | 0.9558 | - |
| 0.7999 | 6572 | - | 0.9626 |
| 0.8520 | 7000 | 0.9696 | - |
| 0.9129 | 7500 | 0.9525 | - |
| 0.9737 | 8000 | 0.9641 | - |
| 0.9999 | 8215 | - | 0.9620 |
| 1.0 | 8216 | - | 0.9620 |
1@inproceedings{reimers-2019-sentence-bert,
2 title = "Sentence-BERT: Sentence Embeddings using Siamese BERT-Networks",
3 author = "Reimers, Nils and Gurevych, Iryna",
4 booktitle = "Proceedings of the 2019 Conference on Empirical Methods in Natural Language Processing",
5 month = "11",
6 year = "2019",
7 publisher = "Association for Computational Linguistics",
8 url = "https://arxiv.org/abs/1908.10084",
9}1@misc{henderson2017efficient,
2 title={Efficient Natural Language Response Suggestion for Smart Reply},
3 author={Matthew Henderson and Rami Al-Rfou and Brian Strope and Yun-hsuan Sung and Laszlo Lukacs and Ruiqi Guo and Sanjiv Kumar and Balint Miklos and Ray Kurzweil},
4 year={2017},
5 eprint={1705.00652},
6 archivePrefix={arXiv},
7 primaryClass={cs.CL}
8}