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ankh-base-convbert-q3 – AI Model by joanitolopo | AlphaNeural AI
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ankh-base-convbert-q3
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pytorch
ankh-base-convbert-q3
protein-language-model
ankh
secondary-structure-prediction
q3
convbert
biomap-research/ssp_q3
ElnaggarLab/ankh-base
finetune
us
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Ankh Base ConvBERT Q3
This model is a downstream Q3 secondary structure prediction head trained on frozen Ankh Base embeddings.
Architecture
Frozen backbone: Ankh Base
Downstream head: ConvBERTForMultiClassClassification
Input dim: 768
Hidden dim: 384
Attention heads: 4
Kernel size: 7
Dropout: 0.2
Training Status
Last completed epoch: 5
Best validation Q3 accuracy: 0.4803939766583911
Important Note
This repository contains only the downstream head. For inference, load Ankh Base first, extract embeddings, then pass the embeddings to this head.
