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dnagpt/
t5-gene-eng-small

Name: t5-gene-eng-small
Availability: InStock

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A T5-large model

Trained from scratch on a mixed dataset of DNA, protein sequences, and English text

python

import torch
import numpy as np
from transformers import AutoTokenizer, AutoModelForSeq2SeqLM, Seq2SeqTrainer, Seq2SeqTrainingArguments
from datasets import load_dataset

tokenizer = AutoTokenizer.from_pretrained("dnagpt/t5-gene-eng-small")
print(tokenizer.tokenize("ATCGGAAGGTAAGGGAAAGCG"))

from transformers import AutoModelForSeq2SeqLM
model = AutoModelForSeq2SeqLM.from_pretrained("dnagpt/t5-gene-eng-small", from_flax=True)
print(model.config)