Task type: protein-level classification
Binary label represented by 1 for the soluble and 0 for the membrane-bound.
Model input type: SA(Structure-aware) sequence
Performance (on test set): 94.31% Accuracy
LoRA config:
- r: 8
- lora_dropout: 0
- lora_alpha: 16
- target_modules: ["query", "key", "value", "intermediate.dense", "output.dense"]
- modules_to_save: ["classifier"]
Training config:
- optimizer:
- class: AdamW
- betas: (0.9, 0.98)
- weight_decay: 0.01
- learning rate: 5e-4
- epoch: 100
- batch size: 64
- precision: 16-mixed
