The models were trained for 3D neuron segmentation in label-free microscopy across:
species: rat, mouse, human
modalities: oblique illumination and Dodt gradient contrast (DGC / DODT)
Repository contents
The repository includes trained weights for five model families:
nnU-Net v2
3D U-Net
StarDist3D
Cellpose
micro-SAM
Weights are organized into separate folders by model family and training configuration.
This dataset, code and weights accompanies the manuscript:
"A large-scale multi-species resource reveals cross-species generalization in label-free 3D neuron segmentation."
If you use this weights in your work, please cite the associated publication once available.
