songlab/

hg38-variant-consequences

Pre-computed VEP consequences for all possible single nucleotide variants (SNVs) in the human genome (GRCh38/hg38), with cis-regulatory element (CRE) annotations from ENCODE SCREEN. Code: https://github.com/gonzalobenegas/hg38-variant-consequences

VEP container: docker://ensemblorg/ensembl-vep:release_109.1 VEP flags: --most_severe --distance 1000 CRE source: ENCODE… See the full description on the dataset page: https://huggingface.co/datasets/songlab/hg38-variant-consequences.