This repository provides the local ontology database to be used by StructSense (in general can be used for any other purpose), including both structured ontological data and precomputed vector embeddings for efficient semantic search.
3,925,124 classes
2,683,756 synonyms
Data storage:
SQLite → structured ontology data (bioportal.db)
Embeddings → vector embeddings (to be uploaded)
Vector embeddings (includes preferred label +… See the full description on the dataset page:
https://huggingface.co/datasets/sensein/ontology-sqlite-vectorstore.
