Data files for Central Dogma Transformer II (CDT-II).
File
Description
Size
morris_celllevel_effects_2361.h5
Cell-level perturbation effects (TSS, 2,361 genes)
41 MB
morris_snp_celllevel_effects_2361.h5
Cell-level perturbation effects (SNP, 2,361 genes)
34 MB
k562_gene_embeddings_aligned.h5
Gene embeddings from scGPT (2,360 genes)
4.4 MB
cdt_morris_celllevel_best.pt
Trained CDT-II model weights
80 MB
Enformer Embeddings… See the full description on the dataset page: https://huggingface.co/datasets/nobusama17/CDT2-data. 
