This dataset contains the synthetic test sets used to evaluate TReconLM, a transformer-based model for trace reconstruction of noisy DNA sequences (see our paper).
The real-world datasets used for fine-tuning are available here:
Microsoft Clustered Nanopore Reads
Noisy DNA Dataset
The corresponding test sets used in the paper can be reproduced using the preprocessing scripts in our GitHub repository under data/.
Files Included… See the full description on the dataset page: https://huggingface.co/datasets/mli-lab/TReconLM_datasets.
