This data was used to train model:
https://huggingface.co/mevol/BiomedNLP-PubMedBERT-ProteinStructure-NER-v3.1
There are 20 different entity types in this dataset:
"bond_interaction", "chemical", "complex_assembly", "evidence", "experimental_method", "gene",
"mutant", "oligomeric_state", "protein", "protein_state", "protein_type", "ptm", "residue_name",
"residue_name_number","residue_number", "residue_range", "site", "species", "structure_element",
"taxonomy_domain"
The… See the full description on the dataset page:
https://huggingface.co/datasets/mevol/protein_structure_NER_model_v3.1.
