Pre-computed MCscan protein-based synteny analysis results for 30+ plant genomes.
plant-msyn-data/
├── mcscan_results/
│ ├── bed_files/ # Gene position files (
.bed) + database_genomes.txt whitelist
│ ├── i1_blocks/ # Synteny block files (.i1.blocks)
│ ├── lifted_anchors/ # Syntenic anchor pair files (*.lifted.anchors)
│ ├── last_filtered_by_i1/ # I1-filtered LAST alignments
│… See the full description on the dataset page:
https://huggingface.co/datasets/Yoshigold/plant-msyn-data.
