DLKcat (BRENDA and SABIO-RK) with splits from Biomap, and repeated and short sequences removed. Enzymes with multiple reactions have their kcat averaged.
The kcat is log10 normalized, so the unit is log10(1/s). However, because it is averaged over reactions and also reaction ambiguous, it is really just a general proxy for catalytic rate. Higher is faster.
Processing:
import pandas as pd
from datasets import Dataset, DatasetDict, concatenate_datasets
def process_dataset(dataset_dict):… See the full description on the dataset page:
https://huggingface.co/datasets/GleghornLab/enzyme_kcat.
